PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV34370.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family AP2
Protein Properties Length: 507aa    MW: 57092.9 Da    PI: 7.7741
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV34370.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.94.4e-17146195155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  KZV34370.1 146 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDKAAIKFRG 195
                 78*******************......55************************997 PP

2AP243.86.4e-14239289155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 s+y+GV+ +k  grW+A+   +     +k+++lg f+t+ eAa+a+++a+ k +g
  KZV34370.1 239 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEIEAARAYDKAAIKCNG 289
                 89********.7******5553..2.26**********99**********99776 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.63E-15146204IPR016177DNA-binding domain
PfamPF008475.0E-9146195IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.4E-17147203IPR001471AP2/ERF domain
SMARTSM003801.1E-30147209IPR001471AP2/ERF domain
CDDcd000183.39E-12147202No hitNo description
PROSITE profilePS5103217.688147203IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-17239298IPR016177DNA-binding domain
PfamPF008471.4E-9239289IPR001471AP2/ERF domain
CDDcd000185.50E-24239299No hitNo description
Gene3DG3DSA:3.30.730.102.5E-16240297IPR001471AP2/ERF domain
SMARTSM003802.6E-31240303IPR001471AP2/ERF domain
PROSITE profilePS5103215.461240297IPR001471AP2/ERF domain
PRINTSPR003675.9E-6241252IPR001471AP2/ERF domain
PRINTSPR003675.9E-6279299IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010073Biological Processmeristem maintenance
GO:0010093Biological Processspecification of floral organ identity
GO:0048316Biological Processseed development
GO:0048481Biological Processplant ovule development
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 507 aa     Download sequence    Send to blast
MWNLNDSPDR RVDEESEGWS DEKGKWVGSV SNSSSSAVVI EDGSEEEDAE RGGGRKRNSR  60
IFGFSTNNDL KEDDAGGGSP PVTRQFFPVD ESGMRGGEAT DIPRAHWVGV KFCQFEPSDG  120
AAAGKSMMEV PQPMKKSRRG PRSRSSQYRG VTFYRRTGRW ESHIWDCGKQ VYLGGFDTAH  180
AAARAYDKAA IKFRGIEADI NFSLEDYEDD LKQASLNLTK EEFVHVLRRQ STGYPRGSSK  240
YRGVTLHKCG RWEARMGQFL GKKYVYLGLF DTEIEAARAY DKAAIKCNGK EAVTNFDPTI  300
YEEEMKSAVS QSSNATTDYN LDLSLGNSAS KSSRESGFRD QLSKSKQVEV DRRHLHGLRP  360
ELNFQQQMTS TETGHHQRKS DGYNETETLQ LLSQTHLHSS GERRHNGRFG EPNEPHHMLP  420
MYSTPFRPQN YPIHHHQYFP TRSGPNGSMR GGVDFCSVST NEQQWQMNHQ LASAAASSGF  480
PQAQNILTPP NQNWLHKNGI HSFMRPS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011099110.10.0PREDICTED: floral homeotic protein APETALA 2-like isoform X1
SwissprotP479271e-132AP2_ARATH; Floral homeotic protein APETALA 2
TrEMBLQ84U240.0Q84U24_ANTMA; LIPLESS1
STRINGVIT_07s0031g00220.t011e-177(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA20192365
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36920.21e-127AP2 family protein